From xcrysden@democritos.it Wed Dec 7 05:11:48 2005
From: xcrysden@democritos.it (Masayoshi Mikami)
Date: Wed, 7 Dec 2005 14:11:48 +0900
Subject: [xcrysden] mpeg-making with xcrysden on MacOSX
Message-ID: <426d9c06a2dda6da8855fbbc2ae5de0c@rc.m-kagaku.co.jp>
Dear all,
I would appreciate very much, if someone could tell me how to make mpeg
file using "Animation Control Center" in xcrysden (v.1.4.1) on MacOSX.
I tried to compile the mpeg_encode "mpeg_encode-1.5b-src.tar.gz" on the
MacOSX (10.3.9), but I have not yet succeeded... Someone could compile
it on MacOSX ?
(the mpeg_encode seems quite old, so other encoders might be available
for this purpose ? I would like to know ...)
Otherwise, I would appreciate the method "how to convert animation gif
to mpeg", because I was able to make animation gif file using
"Animation Control Center" (whirlgif304.tar.gz was successfully
installed on the MacOSX). Is there a freeware for such purpose ?
Yours truly,
Masayoshi Mikami
From xcrysden@democritos.it Wed Dec 14 01:24:51 2005
From: xcrysden@democritos.it (Chang'e Weng)
Date: Tue, 13 Dec 2005 18:24:51 -0700
Subject: [xcrysden] Help-install XCrySDen
Message-ID: <194798a80512131724x3dacf566i3bab19ac30034412@mail.gmail.com>
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Hi all,
I am new to xcrysden an not very familiar with Unix system. I followed the
instruction to compile the source package. But I couldnot find "babel,
convert ..." program in the util directory. I was wondering if I did
something wrong or I need to install those programs first.
Any advice are highly appreciated.
Thanks,
Chang'e
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Content-Type: text/html; charset=ISO-8859-1
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Hi all,
I am new to xcrysden an not very familiar with Unix system. I followed=
the instruction to compile the source package. But I couldnot find "b=
abel, convert ..." program in the util directory. I was wondering if I=
did something wrong or I need to install those programs first.
Any advice are highly appreciated.
Thanks,
Chang'e
------=_Part_377_24568619.1134523491006--
From xcrysden@democritos.it Wed Dec 14 03:50:48 2005
From: xcrysden@democritos.it (Yansun Yao)
Date: Tue, 13 Dec 2005 21:50:48 -0600
Subject: [xcrysden] Fermi Surface
Message-ID: <1134532248.439f96985bb61@webmail.usask.ca>
Dear Tone,
I'd like to plot the Fermi surface using PWscf results. But I got the error
message : " Error reading BANDGRID_3D_ section, while reading"
I attach my .bxsf file for FCC Al. The words in brackets are my comments,
which were not appear in the actual file. Hope you can give some suggestions.
Thank you so much!
BEGIN_INFO
Fermi Energy: 8.4444 (Fermi Energy calculated by PWscf)
END_INFO
BEGIN_BLOCK_BANDGRID_3D
band_energies
BANDGRID_3D_BANDS
1 ( I want to plot one band)
8 8 8 (8x8x8 MP k-mesh, used in PWscf as well)
0. 0. 0. (Gamma)
-1.000000 -1.000000 1.000000 (reciprocal primitive vector b1)
1.000000 1.000000 1.000000 (b2)
-1.000000 1.000000 -1.000000 (b3)
BAND: 4 (band index 4)
(The following numbers are the band energies of each point in 8x8x8 mesh, 29 in
total)
23.326100 20.613400 19.848800 19.758400 20.281900 18.913800
19.224500 18.044200 17.762300 18.893500 20.770300 22.655200
16.373100 15.760600 15.892000 16.769800 18.396300 14.895600
14.775400 15.398000 14.403700 17.668800 15.486700 14.347100
12.786800 12.409400 13.520200 12.091200 10.006200
END_BANDGRID_3D
END_BLOCK_BANDGRID_3D
Thank you!
Yansun
University of Saskatechwan
From xcrysden@democritos.it Wed Dec 14 16:19:00 2005
From: xcrysden@democritos.it (Patrick Rourke)
Date: Wed, 14 Dec 2005 11:19:00 -0500
Subject: [xcrysden] Re: XCrySDen digest, Vol 1 #75 - 2 msgs
In-Reply-To: <20051214063510.3764.88663.Mailman@democritos.sissa.it>
References: <20051214063510.3764.88663.Mailman@democritos.sissa.it>
Message-ID: <1134577140.43a045f41d5bf@webmail.utoronto.ca>
Hi Yansun,
Perhaps Anton can clarify, but I believe your problem lies in the fact that
you have not specified the band energies at enough points. It is my
understanding that if you want XCrysDen to draw the Fermi surface on a 8x8x8 k-
mesh, you need to specify the band energies at all 8x8x8=512 points in the
reciprocal unit cell, rather than just 29.
Hope this helps,
Patrick Rourke
University of Toronto
> Dear Tone,
> I'd like to plot the Fermi surface using PWscf results. But I got the
> error
> message : " Error reading BANDGRID_3D_ section, while reading"
> I attach my .bxsf file for FCC Al. The words in brackets are my
> comments,
> which were not appear in the actual file. Hope you can give some
> suggestions.
> Thank you so much!
>
> BEGIN_INFO
> Fermi Energy: 8.4444 (Fermi Energy calculated by PWscf)
> END_INFO
> BEGIN_BLOCK_BANDGRID_3D
> band_energies
> BANDGRID_3D_BANDS
> 1 ( I want to plot one band)
> 8 8 8 (8x8x8 MP k-mesh, used in PWscf as
> well)
> 0. 0. 0. (Gamma)
> -1.000000 -1.000000 1.000000 (reciprocal primitive vector b1)
> 1.000000 1.000000 1.000000 (b2)
> -1.000000 1.000000 -1.000000 (b3)
> BAND: 4 (band index 4)
> (The following numbers are the band energies of each point in 8x8x8 mesh, 29
> in
> total)
> 23.326100 20.613400 19.848800 19.758400 20.281900 18.913800
> 19.224500 18.044200 17.762300 18.893500 20.770300 22.655200
> 16.373100 15.760600 15.892000 16.769800 18.396300 14.895600
> 14.775400 15.398000 14.403700 17.668800 15.486700 14.347100
> 12.786800 12.409400 13.520200 12.091200 10.006200
> END_BANDGRID_3D
> END_BLOCK_BANDGRID_3D
> Thank you!
> Yansun
> University of Saskatechwan
>
From xcrysden@democritos.it Wed Dec 21 01:30:23 2005
From: xcrysden@democritos.it (Chang'e Weng)
Date: Tue, 20 Dec 2005 18:30:23 -0700
Subject: [xcrysden] Reading ELF file
Message-ID: <194798a80512201730i464a68fl488d612f70790551@mail.gmail.com>
Dear All,
I was wondering if XCrySDen can display the electron pairs from ELF file.
Thanks,
Chang'e
From xcrysden@democritos.it Mon Dec 26 18:35:25 2005
From: xcrysden@democritos.it (Marco Walterfang)
Date: Mon, 26 Dec 2005 19:35:25 +0100
Subject: [xcrysden] awk-program not found
Message-ID: <000001c60a4b$26affad0$14b2a8c0@mawa>
This is a multi-part message in MIME format.
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charset="us-ascii"
Content-Transfer-Encoding: 7bit
Hello Tone,
I use XCrySDen with Cygwin and so far everything works fine. But just after
starting xcrysden the following warning appears: couldn't find "awk"
program. But awk.exe and gawk.exe are in the cygwin/bin directory. So, what
to do?
Best regards,
Marco
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charset="us-ascii"
Content-Transfer-Encoding: quoted-printable
Hello Tone,
I use XCrySDen with Cygwin and so far =
everything works
fine. But just after starting xcrysden the following warning appears: =
couldn’t
find “awk” program. But awk.exe and gawk.exe are in the =
cygwin/bin
directory. So, what to do?
Best regards,
Marco
------=_NextPart_000_0001_01C60A53.887462D0--
From xcrysden@democritos.it Wed Dec 7 05:11:48 2005
From: xcrysden@democritos.it (Masayoshi Mikami)
Date: Wed, 7 Dec 2005 14:11:48 +0900
Subject: [xcrysden] mpeg-making with xcrysden on MacOSX
Message-ID: <426d9c06a2dda6da8855fbbc2ae5de0c@rc.m-kagaku.co.jp>
Dear all,
I would appreciate very much, if someone could tell me how to make mpeg
file using "Animation Control Center" in xcrysden (v.1.4.1) on MacOSX.
I tried to compile the mpeg_encode "mpeg_encode-1.5b-src.tar.gz" on the
MacOSX (10.3.9), but I have not yet succeeded... Someone could compile
it on MacOSX ?
(the mpeg_encode seems quite old, so other encoders might be available
for this purpose ? I would like to know ...)
Otherwise, I would appreciate the method "how to convert animation gif
to mpeg", because I was able to make animation gif file using
"Animation Control Center" (whirlgif304.tar.gz was successfully
installed on the MacOSX). Is there a freeware for such purpose ?
Yours truly,
Masayoshi Mikami
From xcrysden@democritos.it Wed Dec 14 01:24:51 2005
From: xcrysden@democritos.it (Chang'e Weng)
Date: Tue, 13 Dec 2005 18:24:51 -0700
Subject: [xcrysden] Help-install XCrySDen
Message-ID: <194798a80512131724x3dacf566i3bab19ac30034412@mail.gmail.com>
------=_Part_377_24568619.1134523491006
Content-Type: text/plain; charset=ISO-8859-1
Content-Transfer-Encoding: quoted-printable
Content-Disposition: inline
Hi all,
I am new to xcrysden an not very familiar with Unix system. I followed the
instruction to compile the source package. But I couldnot find "babel,
convert ..." program in the util directory. I was wondering if I did
something wrong or I need to install those programs first.
Any advice are highly appreciated.
Thanks,
Chang'e
------=_Part_377_24568619.1134523491006
Content-Type: text/html; charset=ISO-8859-1
Content-Transfer-Encoding: quoted-printable
Content-Disposition: inline
Hi all,
I am new to xcrysden an not very familiar with Unix system. I followed=
the instruction to compile the source package. But I couldnot find "b=
abel, convert ..." program in the util directory. I was wondering if I=
did something wrong or I need to install those programs first.
Any advice are highly appreciated.
Thanks,
Chang'e
------=_Part_377_24568619.1134523491006--
From xcrysden@democritos.it Wed Dec 14 03:50:48 2005
From: xcrysden@democritos.it (Yansun Yao)
Date: Tue, 13 Dec 2005 21:50:48 -0600
Subject: [xcrysden] Fermi Surface
Message-ID: <1134532248.439f96985bb61@webmail.usask.ca>
Dear Tone,
I'd like to plot the Fermi surface using PWscf results. But I got the error
message : " Error reading BANDGRID_3D_ section, while reading"
I attach my .bxsf file for FCC Al. The words in brackets are my comments,
which were not appear in the actual file. Hope you can give some suggestions.
Thank you so much!
BEGIN_INFO
Fermi Energy: 8.4444 (Fermi Energy calculated by PWscf)
END_INFO
BEGIN_BLOCK_BANDGRID_3D
band_energies
BANDGRID_3D_BANDS
1 ( I want to plot one band)
8 8 8 (8x8x8 MP k-mesh, used in PWscf as well)
0. 0. 0. (Gamma)
-1.000000 -1.000000 1.000000 (reciprocal primitive vector b1)
1.000000 1.000000 1.000000 (b2)
-1.000000 1.000000 -1.000000 (b3)
BAND: 4 (band index 4)
(The following numbers are the band energies of each point in 8x8x8 mesh, 29 in
total)
23.326100 20.613400 19.848800 19.758400 20.281900 18.913800
19.224500 18.044200 17.762300 18.893500 20.770300 22.655200
16.373100 15.760600 15.892000 16.769800 18.396300 14.895600
14.775400 15.398000 14.403700 17.668800 15.486700 14.347100
12.786800 12.409400 13.520200 12.091200 10.006200
END_BANDGRID_3D
END_BLOCK_BANDGRID_3D
Thank you!
Yansun
University of Saskatechwan
From xcrysden@democritos.it Wed Dec 14 16:19:00 2005
From: xcrysden@democritos.it (Patrick Rourke)
Date: Wed, 14 Dec 2005 11:19:00 -0500
Subject: [xcrysden] Re: XCrySDen digest, Vol 1 #75 - 2 msgs
In-Reply-To: <20051214063510.3764.88663.Mailman@democritos.sissa.it>
References: <20051214063510.3764.88663.Mailman@democritos.sissa.it>
Message-ID: <1134577140.43a045f41d5bf@webmail.utoronto.ca>
Hi Yansun,
Perhaps Anton can clarify, but I believe your problem lies in the fact that
you have not specified the band energies at enough points. It is my
understanding that if you want XCrysDen to draw the Fermi surface on a 8x8x8 k-
mesh, you need to specify the band energies at all 8x8x8=512 points in the
reciprocal unit cell, rather than just 29.
Hope this helps,
Patrick Rourke
University of Toronto
> Dear Tone,
> I'd like to plot the Fermi surface using PWscf results. But I got the
> error
> message : " Error reading BANDGRID_3D_ section, while reading"
> I attach my .bxsf file for FCC Al. The words in brackets are my
> comments,
> which were not appear in the actual file. Hope you can give some
> suggestions.
> Thank you so much!
>
> BEGIN_INFO
> Fermi Energy: 8.4444 (Fermi Energy calculated by PWscf)
> END_INFO
> BEGIN_BLOCK_BANDGRID_3D
> band_energies
> BANDGRID_3D_BANDS
> 1 ( I want to plot one band)
> 8 8 8 (8x8x8 MP k-mesh, used in PWscf as
> well)
> 0. 0. 0. (Gamma)
> -1.000000 -1.000000 1.000000 (reciprocal primitive vector b1)
> 1.000000 1.000000 1.000000 (b2)
> -1.000000 1.000000 -1.000000 (b3)
> BAND: 4 (band index 4)
> (The following numbers are the band energies of each point in 8x8x8 mesh, 29
> in
> total)
> 23.326100 20.613400 19.848800 19.758400 20.281900 18.913800
> 19.224500 18.044200 17.762300 18.893500 20.770300 22.655200
> 16.373100 15.760600 15.892000 16.769800 18.396300 14.895600
> 14.775400 15.398000 14.403700 17.668800 15.486700 14.347100
> 12.786800 12.409400 13.520200 12.091200 10.006200
> END_BANDGRID_3D
> END_BLOCK_BANDGRID_3D
> Thank you!
> Yansun
> University of Saskatechwan
>
From xcrysden@democritos.it Wed Dec 21 01:30:23 2005
From: xcrysden@democritos.it (Chang'e Weng)
Date: Tue, 20 Dec 2005 18:30:23 -0700
Subject: [xcrysden] Reading ELF file
Message-ID: <194798a80512201730i464a68fl488d612f70790551@mail.gmail.com>
Dear All,
I was wondering if XCrySDen can display the electron pairs from ELF file.
Thanks,
Chang'e
From xcrysden@democritos.it Mon Dec 26 18:35:25 2005
From: xcrysden@democritos.it (Marco Walterfang)
Date: Mon, 26 Dec 2005 19:35:25 +0100
Subject: [xcrysden] awk-program not found
Message-ID: <000001c60a4b$26affad0$14b2a8c0@mawa>
This is a multi-part message in MIME format.
------=_NextPart_000_0001_01C60A53.887462D0
Content-Type: text/plain;
charset="us-ascii"
Content-Transfer-Encoding: 7bit
Hello Tone,
I use XCrySDen with Cygwin and so far everything works fine. But just after
starting xcrysden the following warning appears: couldn't find "awk"
program. But awk.exe and gawk.exe are in the cygwin/bin directory. So, what
to do?
Best regards,
Marco
------=_NextPart_000_0001_01C60A53.887462D0
Content-Type: text/html;
charset="us-ascii"
Content-Transfer-Encoding: quoted-printable
Hello Tone,
I use XCrySDen with Cygwin and so far =
everything works
fine. But just after starting xcrysden the following warning appears: =
couldn’t
find “awk” program. But awk.exe and gawk.exe are in the =
cygwin/bin
directory. So, what to do?
Best regards,
Marco
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