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dear prof. Kokalj,<BR>yes our system has gdb installed. i recompiled the package and it crashed again.<BR>this time command "WHERE" resulted in :<BR> <BR>"<font style="font-size: 8pt;" size="1" face="Courier New">Program received signal SIGSEGV, Segmentation fault.<br>0x00000030c7873155 in _int_malloc () from /lib64/libc.so.6<br>(gdb) Quit<br>(gdb) where<br>#0 0x00000030c7873155 in _int_malloc () from /lib64/libc.so.6<br>#1 0x00000030c7874e2e in malloc () from /lib64/libc.so.6<br>#2 0x00000030c78754e8 in realloc () from /lib64/libc.so.6<br>#3 0x0000000000462b7a in xcRealloc (ptr=0x0, size=1336) at memory.c:47<br>#4 0x0000000000481480 in cryIsosurfClip (in=0x1184820, n=..., p0=...) at cryClip.c:236<br>#5 0x000000000047a969 in CropBz_New (wc=0x108b2c0, iso=0x108acb0) at fs.c:257<br>#6 0x0000000000480a33 in CRY_SurfCmd (clientData=0x778010, interp=0x737340, argc=26, argv=0x739aa0) at crySurf.c:540<br>#7 0x00002aaaab123fbf in TclInvokeStringCommand () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#8 0x00002aaaab1251b9 in TclEvalObjvInternal () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#9 0x00002aaaab167d70 in TclExecuteByteCode () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#10 0x00002aaaab1a79ad in TclObjInterpProcCore () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#11 0x00002aaaab1251b9 in TclEvalObjvInternal () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#12 0x00002aaaab167d70 in TclExecuteByteCode () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#13 0x00002aaaab1a79ad in TclObjInterpProcCore () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#14 0x00002aaaab1251b9 in TclEvalObjvInternal () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#15 0x00002aaaab126393 in Tcl_EvalObjv () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#16 0x00002aaaab1267f0 in TclEvalObjEx () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#17 0x00002aaaab1a8321 in Tcl_UplevelObjCmd () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#18 0x00002aaaab1251b9 in TclEvalObjvInternal () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#19 0x00002aaaab167d70 in TclExecuteByteCode () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#20 0x00002aaaab1a79ad in TclObjInterpProcCore () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#21 0x00002aaaab1251b9 in TclEvalObjvInternal () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#22 0x00002aaaab125e16 in TclEvalEx () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#23 0x00002aaaab126196 in Tcl_EvalEx () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#24 0x00002aaaaadf1da2 in Tk_BindEvent () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtk8.5.so<br>#25 0x00002aaaaae3394d in CanvasDoEvent () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtk8.5.so<br>#26 0x00002aaaaae345af in CanvasBindProc () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtk8.5.so<br>#27 0x00002aaaaadfca24 in Tk_HandleEvent () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtk8.5.so<br>#28 0x00002aaaaadfcce0 in WindowEventProc () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtk8.5.so<br>#29 0x00002aaaab19951d in Tcl_ServiceEvent () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#30 0x00002aaaab19978e in Tcl_DoOneEvent () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtcl8.5.so<br>#31 0x00002aaaaadfc24b in Tk_MainLoop () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtk8.5.so<br>#32 0x00002aaaaae09827 in Tk_MainEx () from /home/mafarhan/programs/xcrysden-1.5.53/external/lib/libtk8.5.so<br>#33 0x0000000000405a60 in main (argc=4, argv=0x7fffffffd368) at xcAppInit.c:412<br></font>"<BR>i don't know if this info points any where or not !<BR>Regards,<BR>M. Arshad Farhan<BR><br> <BR><div><div id="SkyDrivePlaceholder"></div>> From: tone.kokalj@ijs.si<br>> To: xcrysden@democritos.it<br>> Date: Tue, 13 Mar 2012 09:45:44 +0100<br>> Subject: Re: [xcrysden] problem in compiling Xcrysden<br>> <br>> On Tue, 2012-03-13 at 17:27 +0900, εΝεΟ ΗΡΤΟ αΡΝΗζ wrote:<br>> > Dear Prof. Kokalj,<br>> > thank you very much for your help.<br>> > i had successfully compiled Xcrysden-1.5.53 ; however when i executed<br>> > the program for FERMI SURFACE rendering, it crashed just like the<br>> > previous version (the reason why i started to compile it again).<br>> > the error reads:<br>> > "*** glibc detected<br>> > *** /home/mafarhan/programs/xcrysden-1.5.53/bin/xcrys: free(): invalid<br>> > next size (normal): 0x000000001bf55700 ***<br>> <br>> Check if you have gdb debugger and if so, then compile xcrysden<br>> with enabled debugging (i.e. set CFLAGS = -g in Make.sys). Do:<br>> <br>> 1. make clean<br>> 2. make xcrysden<br>> 3. ./xcrysden -d<br>> <br>> and after crash say "where" in the gdb prompt. Perhaps the message will<br>> be informative. Send me the info.<br>> <br>> Regards, Tone<br>> <br>> -- <br>> Anton Kokalj<br>> J. Stefan Institute, Jamova 39, 1000 Ljubljana, Slovenia <br>> (tel: +386-1-477-3523 // fax:+386-1-477-3822)<br>> <br>> Please, if possible, avoid sending me Word or PowerPoint attachments.<br>> See: http://www.gnu.org/philosophy/no-word-attachments.html<br>> <br>> _______________________________________________<br>> XCrySDen mailing list<br>> XCrySDen@democritos.it<br>> http://www.democritos.it/mailman/listinfo/xcrysden<br></div> </div></body>
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