[xcrysden] XCrysden "Save Current State and Structure" on Mac OSX

[Zhu, Jianxin]

Dear Tone, 

I did update the program to 1.5.53 on one of my MacOSX machines and the
problem remains. 
Attached below is the output to screen after I click "Save Current State
and Structure".
The output is essentially the same as that from 1.5.24.

Best regards,

Jianxin


....

  Version: 1.5.53

  Please report bugs to: tone.kokalj at ijs.si


  TERMS OF USE:
  -------------
  XCRYSDEN is released under the GNU General Public License.

  Whenever graphics generated by XCRYSDEN are used in scientific
  publications, it shall be greatly appreciated to include an explicit
  reference. The preferred form is the following:

  [ref] A. Kokalj, Comp. Mater. Sci., Vol. 28, p. 155, 2003.
        Code available from http://www.xcrysden.org/.

XCRYSDEN_TOPDIR=/sw/share/xcrysden-1.5.53
XCRYSDEN_SCRATCH=/Users/jxzhu/XCryScratch

Running on platform : unix
   Operating system : Darwin
Package ImageMagick's convert: /opt/local/bin/convert
Package ImageMagick's import: /opt/local/bin/import
Package Whirlgif: /opt/local/bin/whirlgif
Package Ppmtompeg: /sw/bin/ppmtompeg
Package Xwd: /usr/X11/bin/xwd
Executing: /sw/lib/xcrysden-1.5.53/ftnunit
Executing: /sw/lib/xcrysden-1.5.53/gengeom 0 1 21 1 1 1 1
/Users/jxzhu/XCryScratch/xc_25418/xc_gengeom.25418
/Users/jxzhu/XCryScratch/xc_25418/xc_str2xcr.25418
Executing: /sw/lib/xcrysden-1.5.53/gengeom 2 1 21 5 1 1 1
/Users/jxzhu/XCryScratch/xc_25418/xc_struc.25418
/Users/jxzhu/XCryScratch/xc_25418/xc_str2xcr.25418
reading PRIMCOORD
reading CONVCOORD
Number of Atoms:  27
Number of Frames: 12
natoms: 27 , ndel: 0
Filtered number of atoms: 27
Estimated number of bonds = 108
sInfo(dim) = 3; periodic(dim) = 3
saving colSh ...
saving datagrid ...
saving rotations/translations ...
/sw/share/xcrysden-1.5.53/xcrysden: line 233: 25418 Abort trap: 6
 ${XCRYSDEN_XCRYS_DIR}/xcrys ${XCRYSDEN_TOPDIR}/Tcl/xcInit.tcl $USE --
$XCRYSDEN_TOPDIR $XCRYSDEN_SCRATCH "$@" > /dev/null













-----Original Message-----
From: Tone Kokalj <tone.kokalj at ijs.si>
Organization: J. Stefan Institute, Jamova 39, 1000 Ljubljana, Slovenia
(tel: +386-1-477-3523 // fax:+386-1-477-3822)
Reply-To: <tone.kokalj at ijs.si>, XCrySDen mailing list
<xcrysden at democritos.it>
Date: Fri, 18 Jan 2013 17:58:46 +0100
To: <xcrysden at democritos.it>
Subject: Re: [xcrysden] XCrysden "Save Current State and Structure" on Mac
OSX

>On Fri, 2013-01-18 at 16:15 +0000, Zhu, Jianxin wrote:
>> Hi Tone and Xcrysden users,
>> 
>> 
>> I spent long time on putting in customized labels etc on a structure
>> (imported from wien2k), and then clicked "Save Current State and
>> Structure" trying to save what I have made.
>> Unfortunately, the Xcrysden program simply crashed.
>
>I am sorry for the loss. I don't know why it crashed.
>
>> Is it possible that this problem is related to the fact the structure
>> is imported from wien2k structure file?
>
>No, it is not related to that at all.
>
>> 
>> On Mac, I am now trying to update the program to 1.5.53 but not sure
>> whether it will make any difference.
>
>Let me know if the problem persists in the new version.
>
>Regards, Tone
>
>-- 
>Anton Kokalj
>J. Stefan Institute, Jamova 39, 1000 Ljubljana, Slovenia
>(tel: +386-1-477-3523 // fax:+386-1-477-3822)
>
>Please, if possible, avoid sending me Word or PowerPoint attachments.
>See:  http://www.gnu.org/philosophy/no-word-attachments.html
>
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